CGCI Data Matrix
CGCI data matrix is being continuously updated as new data from ongoing projects become available. See "How to Navigate the CGCI Data Matrix" for details on different types of available CGCI data.
The Genomic Data Commons (GDC) is currently working on developing their whole genome sequencing (WGS) analysis pipeline. While some CGCI analyzed WGS data is already available via the GDC Data Portal, not all aliquots have completed the analysis phase. The CGCI aliquots that are currently still undergoing WGS analysis at the GDC are listed here: https://ocg.cancer.gov/file/cgciwgsaliquotsunderanalysisatgdcxlsx.
| Disease | Patient Data | Gene Expression | Copy Number | Methylation | miRNA | Sequence | Other | ||||||||||||||||
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| Burkitt's Lymphoma (BLGSP) - Ongoing - | |||||||||||||||||||||||
| Burkitt's Lymphoma (BLGSP) |
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| HIV+ Tumor Molecular Characterization Project (HTMCP) - Ongoing - | |||||||||||||||||||||||
| HIV+ Diffuse Large B-Cell Lymphoma (HTMCP-DLBCL) |
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| HIV+ Cervical Cancers (HTMCP-CC) |
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| HIV+ Lung Cancers (HTMCP-LC) |
Clinical File
Sample Matrix
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| Non-Hodgkin's Lymphoma (NHL) - Completed - | |||||||||||||||||||||||
| Diffuse Large B-Cell Lymphoma (NHL-DLBCL) |
Sample Matrix
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| Follicular Lymphoma (NHL-FL) |
Sample Matrix
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| CGCI Data Legend | |
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Brown: Public*
Red: Protected†
Black: Unavailable
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All DCC Controlled† access links require an eRA Commons account via Globus.org |